I use a variety of specialized software for note taking, managing academic papers, etc. Rather than write my own review of Scrivener, I link to someone else’s here. I added a comment to her post, about using it with bibliography software.
Feel free to add links to your own favorite Scrivener reviews, in the comments. There is a fair amount of overhead in learning Scrivener, but for longer projects (eg > 10,000 words) it saves writers from “multiple version hell.”
In this in-depth Scrivener 3 review, I show you why Scrivener is the best word processor for academic writing. Unlike Word, Scrivener 3 keeps all your research and writing in one place. Its best features? The ability to drag and drop to reorganize your draft, split screen mode, word targets, and linguistic focus.
Source: Scrivener 3 for Academic Writing: An In-Depth Review